Section 6 ENRICHMENT ANALYSER (GENES) - EAG

6.1 Input Interface

Input

• Step 1: Enter a list of genes. Please ensure that the input gene identifiers are official symbols; otherwise, the error messages will be prompted.

• Step 2: Select from a list of supported ontologies.

• More Controls: Use additional parameters to fine-tune the above steps.

• SUBMIT: click the SUBMIT button to execute the analysis.

Output

• Example Output includes interactive tables and high-quality figures for enrichment results. A summary of input data and the server-side computation runtime is also returned for reference.

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FIGURE 6.1: The interface of ENRICHMENT ANALYSER (GENES) - EAG, including the Show/Hide Info toggle button that contains the help information on inputs, outputs, and other information.

6.2 Enrichment Results

• Under the Input Gene Information tab, An interactive table displays the user-input gene list.

FIGURE 6.2: The user-input data displayed under the Input Gene Information tab returned for exploration.

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• Under the Output: Enriched Terms tab, An interactive table lists enriched ontology terms.

FIGURE 6.3: An interactive table listing enriched ontology terms under the Output: Enriched Terms tab.

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• Under the tab Output: Dotplot, An dotplot illustrates enriched ontology terms. The downloadable pdf file is also provided.

FIGURE 6.4: A dotplot for enriched ontology terms.

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• Under the Output: Forest Plot tab, A forest plot illustrates enriched ontology terms. The downloadable pdf file is also provided.

FIGURE 6.5: A forest plot for enriched ontology terms.